BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B09LP1|AL430497
(326 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 283 1e-76
>3x_Contig1807
Length = 66587
Score = 283 bits (127), Expect = 1e-76
Identities = 170/201 (84%)
Strand = Plus / Minus
Query: 12 aagcacaatttattttaagttggtattgtttgccaagtgtgccaagttctcactgaatag 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27161 aagcacaatttattttaagttggtattgtttgccaagtgtgccaagttctcactgaatag 27102
Query: 72 atgatcttcgaggtacttaaacgtatgcgtttactacataggatacacgcttgctaamak 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 27101 atgatcttcgaggtacttaaacgtatgcgtttactacataggatacacgcttgctaaaag 27042
Query: 132 cakttmmttatsttmamtcttttattttmtmmmmmkcmmtcmtkactttttckakmcmcc 191
|| || | || | | || | ||||| | || | |||||||| | | ||
Sbjct: 27041 cagttaatgatcgtaaagctgtgattttataaaaagaaatcatgactttttcgagacacc 26982
Query: 192 aggctacgttktttcgcmtgt 212
|||||||||| |||||| |||
Sbjct: 26981 aggctacgttgtttcgcatgt 26961
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.55 0.737 1.45
Gapped
Lambda K H
1.55 0.737 1.45
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 982
Number of Sequences: 1807
Number of extensions: 982
Number of successful extensions: 250
Number of sequences better than 1.0e-20: 1
length of query: 326
length of database: 10,358,551
effective HSP length: 14
effective length of query: 312
effective length of database: 10,333,253
effective search space: 3223974936
effective search space used: 3223974936
T: 0
A: 40
X1: 5 (11.2 bits)
X2: 13 (29.0 bits)
S1: 11 (25.0 bits)
S2: 44 (98.6 bits)